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| Ambos lados da revisão anterior Revisão anterior Próxima revisão | Revisão anterior | ||
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eventos:venables2007:materiais [2007/09/10 22:57] paulojus |
eventos:venables2007:materiais [2007/09/22 23:56] (atual) paulojus |
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| - | ====== Materiais do curso ====== | + | ====== Venable's short course -- materials ====== |
| + | |||
| + | **Atention:** the download of the course materials below **DO NO WORK WITH INTERNET EXPLORER**. Use another browser, as for instance [[http://http://www.mozilla.com|Mozilla Firefox]] | ||
| ==== Course materials ==== | ==== Course materials ==== | ||
| Linha 7: | Linha 9: | ||
| | {{eventos:venables2007:powerpoint_slides.zip|Slides powerpoint}}| -- | -- | | | {{eventos:venables2007:powerpoint_slides.zip|Slides powerpoint}}| -- | -- | | ||
| + | |||
| ==== Other materials ==== | ==== Other materials ==== | ||
| - | - ASOR package | + | - ASOR package (//already installed in the C3SL servers//) |
| - | * {{eventos:venables2007:asor_1.0.tar.gz|.tar.gz file}} (for linux install) | + | * {{eventos:venables2007:asor_1.0.tar.gz|.tar.gz file}} (for linux install) \\ **NOTE:** the WIKI system makes all files lower case(!) so, before installing this in your LINUX box you need to rename the file:<code> |
| + | $ mv asor_1.0.tar.gz ASOR_1.0.tar.gz | ||
| + | $ sudo R CMD INSTALL ASOR_1.0.tar.gz | ||
| + | </code> | ||
| * {{eventos:venables2007:asor_1.0.zip|.zip file}} (for windows install) | * {{eventos:venables2007:asor_1.0.zip|.zip file}} (for windows install) | ||
| - Text: {{eventos:venables2007:exegeses.pdf|Exegeses in Linear Models}} | - Text: {{eventos:venables2007:exegeses.pdf|Exegeses in Linear Models}} | ||
| + | - Additional scripts: | ||
| + | * {{eventos:venables2007:boston.r|Boston housing price -- setting training and test data for tree model using ''rpart()'' and ''randomForest''}} | ||
| + | * {{eventos:venables2007:menarche.r|Menarche data -- GLM for binomial counts}} | ||
| + | * {{eventos:venables2007:plinear.r|the plinear method for non linear models}} | ||
| - | ===== Instructions ===== | + | ===== Instructions for usage at LM/C3SL - UFPR===== |
| - | In the following ''$'' is the LINUX prompt and ''>'' is the R prompt | + | At UFPR the course will be run in the LM (Laboratório Multiterminal) run by C3SL (Contro de computação científica e Softaware Livre). The LM provides LINUX terminals connected with servers. The user working area is common meaning you can user whatever terminal and/or server to get access to your account. |
| - | - Open a ''terminal window'' where you can type LINUX commands | + | In the following instructions the LINUX prompt is ''$'' and the R prompt is ''>''. |
| - | - create a working directory called ''Rmodelling'' for the course and get into the directory:<code> | + | |
| + | - Open a Linux ''terminal window'' for issuing LINUX commands | ||
| + | - create a working directory called, for example, ''Rmodelling'' for use in this course move to it:<code> | ||
| $ mkdir Rmodelling | $ mkdir Rmodelling | ||
| $ cd Rmodelling | $ cd Rmodelling | ||
| Linha 28: | Linha 40: | ||
| Rmodelling$ unzip slides.zip | Rmodelling$ unzip slides.zip | ||
| </code> | </code> | ||
| - | - copy two files from the CSV directory to the working directory:<code> | + | - copy one file from the CSV directory to the working directory:<code> |
| - | Rmodelling$ cp CSV/.RData . | + | Rmodelling$ cp CSV/makeInputData.r . |
| - | Rmodelling$ cp CSV/makeInputData . | + | |
| </code> | </code> | ||
| - Start ''R'' inside the ''Rcourse'' directory --- this will make ''Rcourse'' your //working directory//. You can do this in two different ways: | - Start ''R'' inside the ''Rcourse'' directory --- this will make ''Rcourse'' your //working directory//. You can do this in two different ways: | ||
| Linha 36: | Linha 47: | ||
| Rmodelling$ R | Rmodelling$ R | ||
| </code> | </code> | ||
| - | * running from inside the editor ''xemacs'' --- open ''xemacs'' and stard R from it with ESC SHIFT-X SHIFT-R<code> | + | * running from inside the editor ''xemacs'' using the ESS (Emacs Speaks Statistics) package. To do so open ''xemacs'' and stard R from it with ''ESC SHIFT-X SHIFT-R''<code> |
| - | Rmodelling$ xemacs & | + | Rmodelling$ xemacs makeInputData.R & |
| </code> | </code> | ||
| - | - From inside ''R'' run the ''makeInputData.R'' script<code> | + | - From inside ''R'' run the ''makeInputData.r'' script<code> |
| - | > source("makeInputData.R") | + | > source("makeInputData.r") |
| </code> | </code> | ||
| - The script will automatically generate another script file called ''inputData.R'' which reads all the data needed for the course. This script file should be run with:<code> | - The script will automatically generate another script file called ''inputData.R'' which reads all the data needed for the course. This script file should be run with:<code> | ||
| > source("inputData.R") | > source("inputData.R") | ||
| </code> | </code> | ||
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